Microsomal Stability

About the Assay

Sygnature Discovery’s microsomal metabolic stability assay provides a robust in vitro system for assessing the intrinsic clearance (CLint) of drug compounds using liver microsomes from multiple preclinical species and human donors. Liver microsomes contain a subset of phase I and phase II drug‑metabolising enzymes, predominantly cytochrome P450 isoforms and associated oxidative pathways, offering a mechanistically relevant model for evaluating metabolic turnover. By monitoring parent compound depletion over time, the assay quantifies microsomal stability and supports prediction of in vivo clearance using established scaling factors.

This validation included human, mouse, rat, dog and monkey microsomes, selected to represent a broad range of metabolic capabilities and clearance mechanisms. Human microsomes were prepared from pooled donors to minimise inter‑individual variability, while animal microsomes were pooled to ensure representative species performance. A diverse panel of probe substrates spanning CYP1A2, CYP2C9, CYP2C19, CYP2D6 and CYP3A4/5 pathways were incorporated to challenge the system and verify metabolic competence. Assays were run on a Beckman Biomek i5‑MC automated liquid‑handling platform.

The study successfully demonstrated that the microsomal stability assay provides robust, reproducible metabolic intrinsic clearance data suitable for early‑stage optimisation, compound selection and cross-species comparison in drug discovery programs.

Protocol Summary

The microsomal metabolic stability assay evaluates compound turnover by incubating test compounds with pooled liver microsomes and quantifies parent depletion over a series of time points. Test compounds are first prepared from concentrated DMSO stock solutions and combined with microsomes for a short pre‑incubation period. The metabolic reaction is then initiated by addition of co-factor. At predetermined time points, aliquots are removed and quenched to terminate metabolic activity, generating a time course of compound disappearance.

Following centrifugation to remove precipitated proteins, supernatants are pooled for cassette analysis and diluted with water containing internal standard. Samples are analysed via LC–MS/MS to determine the percentage parent compound remaining at each time point. Natural log transformation of compound response–time data enables linear regression to derive the elimination rate constant (k), from which half‑life and intrinsic clearance values are calculated.

The workflow supports high‑throughput automation and ensures excellent reproducibility across assays. The use of pooled microsomes reduces biological variability, while inclusion of a minus‑cofactor control enables differentiation of cofactor‑independent metabolic pathways.

Validation Results

Validation demonstrated that the microsomal stability assay delivers reliable, reproducible CLint values across species.

The graph below presents the validated inter‑assay performance for human liver microsomes. Data represent mean values ± SD.